Selected script details
This demo script performs hiwerarchical clustering by genes or samples, then plots a heatmap. In either case, each data column is transformed to Z-scores (ie normalized by the column mean and standard deviation) before clustering. The input file is a comma-separated values (CSV) file (eg from Excel) with row and column labels: one sample per row, one gene per colum.
Tags:
hb
demo
heatmap
History:
| When |
Who |
JobName |
Time |
Status |
| 2010-07-29 04:10:12 UTC |
Hamid Bolouri |
plot heatmap |
6s |
Done |
| 2010-07-29 04:09:39 UTC |
Hamid Bolouri |
plot heatmap |
6s |
Done |
| 2010-07-28 18:14:38 UTC |
Hamid Bolouri |
heatmap |
7s |
Done |
| 2010-07-28 18:14:30 UTC |
Hamid Bolouri |
heatmap |
6s |
Done |
| 2010-07-28 17:34:54 UTC |
Hamid Bolouri |
heatmap |
6s |
Done |
| 2010-07-28 17:34:41 UTC |
Hamid Bolouri |
heatmap |
6s |
Done |
| 2010-07-28 17:27:47 UTC |
Hamid Bolouri |
heatmap |
7s |
Done |
| 2010-07-28 17:26:34 UTC |
Hamid Bolouri |
heatmap |
6s |
Done |
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Reliability of Results
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